1.Introduction
2.Introduction to biochemical kinetics
3.Review of linear differential equations
4.Introduction to nondimensionalization and scaling
5.Qualitative behavior of simple differential equation models
6.Developing a model from the ground up: Case study of the spread of an infection
7.Phase plane analysis
8.Quasi steady state and enzyme-mediated biochemical kinetics
9.Multiple subunit enzymes and proteins: Cooperativity

10.Dynamic behavior of neuronal membranes

11.Excitable systems and the FitzHugh–Nagumo equations

12.Biochemical modules

13.Discrete networks of genes and cells

14.For further study

15.Extended exercises and projects